Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 551537 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1080244 bp
Thymine Count
1066209 bp
Guanine Count
1105534 bp
Cytosine Count
1107712 bp
Genome Length
4381487 bp
Protein-coding Genes
4148 genes
Non-Coding Genes
247 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DOU91_05280 | Not Available | Positive | 1043786 - 1044511 | 27556.8 |
| type iii secretion apparatus protein orga/mxik | DOU91_05285 | Not Available | Positive | 1044508 - 1045035 | 20114.3 |
| mxin | DOU91_05290 | Not Available | Positive | 1044977 - 1045672 | 26807.6 |
| mxi-spa secretion machinery protein mxil | DOU91_05295 | Not Available | Positive | 1045665 - 1046072 | 15672.0 |
| lipoprotein mxim | DOU91_05300 | Not Available | Positive | 1046056 - 1046484 | 15853.5 |
| transcriptional regulator mxie | DOU91_05305 | Not Available | Positive | 1046614 - 1047246 | 24553.4 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | DOU91_05310 | Not Available | Positive | 1047233 - 1048933 | 63221.5 |
| yopn family type iii secretion system gatekeeper subunit | DOU91_05315 | Not Available | Positive | 1048952 - 1050019 | 40125.4 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | DOU91_05320 | Not Available | Positive | 1050026 - 1052092 | 76349.7 |
| surface presentation of antigens protein spak | DOU91_05325 | Not Available | Positive | 1052105 - 1052506 | 15189.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





