Flavobacterium macacae strain YIM 102600

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium macacae strain YIM 102600 is characterized as a rod-shaped bacterium with the presence of flagella, allowing for motility. The strain has a single replicon, which is a key feature in understanding its genetic organization and replication. Its genomic data can be accessed through the accession number RQVR00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the Flavobacterium genus, F. macacae is likely to play a role in various ecological niches, particularly in aquatic environments where members of this group are commonly found. Flavobacterium species are often associated with the degradation of organic matter, indicating a potential role in nutrient cycling within their ecosystems. This ability to break down complex organic materials may contribute to the overall health of the environments they inhabit, as well as influencing the dynamics of microbial communities. Understanding the specific traits of Flavobacterium macacae strain YIM 102600 can enhance our comprehension of its ecological functions and potential applications in biotechnology, especially in bioremediation or environmental monitoring efforts. As research progresses, the insights gained from this strain may reveal further significance in microbial ecology and its contributions to ecosystem services.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium macacae
Strainstrain YIM 102600

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium macacae strain YIM 102600
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium macacae strain YIM 102600 Scaffold56, whole genome

Gene Summary

Adenine Count

1060770 bp

Thymine Count

1073443 bp

Guanine Count

612808 bp

Cytosine Count

621548 bp

Genome Length

3372979 bp

Protein-coding Genes

3013 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sam-dependent methyltransferaseEG849_10710Not AvailableNegative2326626 - 232734226382.4
low molecular weight phosphotyrosine protein phosphataseEG849_10715Not AvailableNegative2327462 - 232792917256.8
chromosomal replication initiator protein dnaaEG849_10720Not AvailableNegative2327969 - 232939654517.7
acyl-coa thioesteraseEG849_10725Not AvailablePositive2329596 - 233000616180.6
yigz family proteinEG849_10730Not AvailableNegative2330030 - 233064123567.4
had family phosphataseEG849_10735Not AvailableNegative2330645 - 233125323727.3
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdEG849_10740Not AvailableNegative2331246 - 233228939168.2
gnat family n-acetyltransferaseEG849_10745Not AvailablePositive2332317 - 233280218195.4
peptide chain release factor n(5)-glutamine methyltransferaseEG849_10750Not AvailablePositive2332862 - 233371032971.6
ftsx-like permease family proteinEG849_10755Not AvailableNegative2333771 - 233501245109.2

Displaying genes 2131 – 2140 of 3062 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.