Paenimyroides viscosum strain YIM 102796

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Paenimyroides

Description

Paenimyroides viscosum strain YIM 102796 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, which is significant in understanding its genomic structure and replication processes. The strain is cataloged under the accession number RQTJ00000000.1, facilitating its identification and further study within microbial databases. The classification of Paenimyroides viscosum as a Gram-negative organism suggests that it has a distinctive cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This trait can contribute to its interactions with the environment, including its responses to antibiotics and its overall ecological niche. In the context of its biological and ecological significance, the characteristics of Paenimyroides viscosum strain YIM 102796 may influence its adaptability in various habitats. Gram-negative bacteria are often found in diverse environments, and their ability to thrive in different conditions can provide insights into microbial ecology and evolutionary biology. Understanding the traits of this strain may also contribute to research in microbial physiology, potential biotechnological applications, or ecological interactions within its native ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPaenimyroides
SpeciesPaenimyroides viscosum
Strainstrain YIM 102796

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenimyroides viscosum strain YIM 102796 Scaffold86, whole genome

Gene Summary

Adenine Count

995389 bp

Thymine Count

996300 bp

Guanine Count

506553 bp

Cytosine Count

508409 bp

Genome Length

3013749 bp

Protein-coding Genes

2823 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pentapeptide repeat-containing proteinEG242_02405Not AvailablePositive489102 - 48968022096.9
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfEG242_02410Not AvailableNegative489988 - 49086633593.6
glutamine-hydrolyzing gmp synthaseEG242_02415Not AvailableNegative490927 - 49245956823.5
hypothetical proteinEG242_02420Not AvailablePositive492601 - 49335929189.2
Trna-tyrNot AvailableNot AvailablePositive493646 - 493729Not Available
fructose-6-phosphate aldolaseEG242_02430Not AvailableNegative493825 - 49448123584.5
sdr family oxidoreductaseEG242_02435Not AvailableNegative494614 - 49542029354.7
m28 family peptidaseEG242_02440Not AvailablePositive495500 - 49651338687.3
hypothetical proteinEG242_02445Not AvailablePositive496516 - 49697717561.8
long-chain fatty acid--coa ligaseEG242_02450Not AvailablePositive497049 - 49882166676.6

Displaying genes 481 – 490 of 2901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.