Flavobacterium ummariense strain DS-12

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Paenimyroides

Description

Flavobacterium ummariense strain DS-12 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This strain exhibits optimal growth at a temperature of 29.0°C, suggesting a preference for mesophilic environments. As a member of the genus Flavobacterium, strain DS-12 is likely to play a role in the biogeochemical cycling of organic matter, particularly in aquatic environments where such bacteria are commonly found. Its aerobic nature indicates that it requires oxygen for growth, which aligns with the typical ecological niches inhabited by Flavobacterium species, often associated with decomposing organic materials and nutrient-rich waters. Understanding the physiological traits of Flavobacterium ummariense strain DS-12 not only enhances our knowledge of microbial diversity but also underscores the importance of such bacteria in ecosystem functioning. Their role in organic matter decomposition can contribute to nutrient recycling, influencing the productivity and health of aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPaenimyroides
SpeciesPaenimyroides ummariense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium ummariense strain DS-12

Accession NumberFOVI00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3350 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
1_nc_021800: n-acetylmuramyl-l-alanine amidaseSAMN05421741_11814Not Available-2466538 - 246694815479.5
Holin/anti-holinSAMN05421741_11815Not Available-2466952 - 246742217457.7
Putative tail fiberSAMN05421741_11816Not Available-2467432 - 246933367998.8
hypothetical proteinSAMN05421741_11817Not Available-2469346 - 246973814487.0
hypothetical proteinSAMN05421741_11818Not Available-2469750 - 24698694513.36
1_nc_021804: structural proteinSAMN05421741_11819Not Available-2469856 - 247218389136.2
Tape measure proteinSAMN05421741_11820Not Available-2472183 - 247488596496.1
1_nc_021804: hypothetical proteinSAMN05421741_11821Not Available-2474866 - 247524014434.0
hypothetical proteinSAMN05421741_11822Not Available-2475261 - 247561712880.8
1_nc_021804: structural proteinSAMN05421741_11823Not Available-2475617 - 247603614915.3

Displaying genes 1 – 10 of 3451 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites