Paenimyroides viscosum strain YIM 102796

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Paenimyroides

Description

Paenimyroides viscosum strain YIM 102796 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, which is significant in understanding its genomic structure and replication processes. The strain is cataloged under the accession number RQTJ00000000.1, facilitating its identification and further study within microbial databases. The classification of Paenimyroides viscosum as a Gram-negative organism suggests that it has a distinctive cell wall structure, which typically includes an outer membrane containing lipopolysaccharides. This trait can contribute to its interactions with the environment, including its responses to antibiotics and its overall ecological niche. In the context of its biological and ecological significance, the characteristics of Paenimyroides viscosum strain YIM 102796 may influence its adaptability in various habitats. Gram-negative bacteria are often found in diverse environments, and their ability to thrive in different conditions can provide insights into microbial ecology and evolutionary biology. Understanding the traits of this strain may also contribute to research in microbial physiology, potential biotechnological applications, or ecological interactions within its native ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPaenimyroides
SpeciesPaenimyroides viscosum
Strainstrain YIM 102796

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenimyroides viscosum strain YIM 102796 Scaffold86, whole genome

Gene Summary

Adenine Count

995389 bp

Thymine Count

996300 bp

Guanine Count

506553 bp

Cytosine Count

508409 bp

Genome Length

3013749 bp

Protein-coding Genes

2823 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEG242_07590Not AvailableNegative1519082 - 151974725177.5
hypothetical proteinEG242_07595Not AvailableNegative1519852 - 152025916093.3
electron transfer flavoprotein subunit alpha/fixb family proteinEG242_07600Not AvailableNegative1520386 - 152135433788.2
electron transfer flavoprotein beta subunit/fixa family proteinEG242_07605Not AvailableNegative1521384 - 152213026433.9
hypothetical proteinEG242_07610Not AvailablePositive1522324 - 152315131739.7
hypothetical proteinEG242_07615Not AvailableNegative1523167 - 152358615886.3
pyruvate dehydrogenase complex e1 component subunit betaEG242_07620Not AvailablePositive1523799 - 152477936144.6
carboxypeptidase-like regulatory domain-containing proteinEG242_07625Not AvailablePositive1524832 - 152730694889.0
inorganic diphosphataseEG242_07630Not AvailablePositive1527371 - 152789520018.2
hypothetical proteinEG242_07635Not AvailableNegative1527929 - 152821610952.2

Displaying genes 1501 – 1510 of 2901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.