Rhodococcus spongiicola strain LHW50502

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus spongiicola strain LHW50502 is characterized by the presence of flagella, which suggests motility capabilities that could enhance its ecological adaptability. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and stability in its environment. The accession number for this strain is RKLN00000000.1, which serves as a reference for researchers seeking genetic and genomic information. The presence of flagella in Rhodococcus spongiicola strain LHW50502 may provide insights into its ecological roles, particularly in diverse environments where mobility can influence nutrient acquisition and interaction with other microorganisms. The capacity for motility can be crucial for survival in nutrient-limited conditions, potentially allowing this strain to locate and utilize resources more effectively than non-motile counterparts. Overall, the traits of Rhodococcus spongiicola strain LHW50502 highlight its potential ecological significance and adaptability, especially in environments that require the ability to navigate and respond to varying conditions. Further research could elucidate the specific ecological niches this strain occupies and its interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus spongiicola
Strainstrain LHW50502

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus spongiicola strain LHW50502 scaffold29, whole genome

Gene Summary

Adenine Count

664627 bp

Thymine Count

664691 bp

Guanine Count

1316265 bp

Cytosine Count

1322090 bp

Genome Length

3970093 bp

Protein-coding Genes

3444 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEF834_04530Not AvailableNegative967224 - 96757112571.4
hypoxanthine phosphoribosyltransferaseEF834_04535Not AvailableNegative967697 - 96825120239.4
trna lysidine(34) synthetase tilsEF834_04540Not AvailableNegative968264 - 96923533810.4
hydrolaseEF834_04545Not AvailableNegative969232 - 97028737944.5
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseEF834_04550Not AvailableNegative970351 - 97175448180.0
inorganic diphosphataseEF834_04555Not AvailablePositive971975 - 97246618314.5
transcriptional repressor lexaEF834_04560Not AvailablePositive972557 - 97321923667.3
dha2 family efflux mfs transporter permease subunitEF834_04565Not AvailableNegative973287 - 97499960534.7
crotonase/enoyl-coa hydratase family proteinEF834_04570Not AvailableNegative975032 - 97586229335.9
tetr/acrr family transcriptional regulatorEF834_04575Not AvailableNegative975918 - 97663725572.7

Displaying genes 901 – 910 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.