Rhodococcus spongiicola strain LHW50502

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus spongiicola strain LHW50502 is characterized by the presence of flagella, which suggests motility capabilities that could enhance its ecological adaptability. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and stability in its environment. The accession number for this strain is RKLN00000000.1, which serves as a reference for researchers seeking genetic and genomic information. The presence of flagella in Rhodococcus spongiicola strain LHW50502 may provide insights into its ecological roles, particularly in diverse environments where mobility can influence nutrient acquisition and interaction with other microorganisms. The capacity for motility can be crucial for survival in nutrient-limited conditions, potentially allowing this strain to locate and utilize resources more effectively than non-motile counterparts. Overall, the traits of Rhodococcus spongiicola strain LHW50502 highlight its potential ecological significance and adaptability, especially in environments that require the ability to navigate and respond to varying conditions. Further research could elucidate the specific ecological niches this strain occupies and its interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus spongiicola
Strainstrain LHW50502

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus spongiicola strain LHW50502 scaffold29, whole genome

Gene Summary

Adenine Count

664627 bp

Thymine Count

664691 bp

Guanine Count

1316265 bp

Cytosine Count

1322090 bp

Genome Length

3970093 bp

Protein-coding Genes

3444 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-formyltetrahydrofolate cyclo-ligaseEF834_02450Not AvailablePositive525204 - 52583021627.8
fmdb family transcriptional regulatorEF834_02455Not AvailablePositive525918 - 52622610349.6
flagellar biosynthesis protein flgaEF834_02460Not AvailablePositive526329 - 52702424033.9
hypothetical proteinEF834_02465Not AvailableNegative527093 - 5273087691.76
moga/moab family molybdenum cofactor biosynthesis proteinEF834_02470Not AvailableNegative527319 - 52788818933.6
pdz domain-containing proteinEF834_02475Not AvailableNegative527909 - 52933647081.7
sensor histidine kinaseEF834_02480Not AvailableNegative529498 - 53090150547.7
dna-binding response regulatorEF834_02485Not AvailableNegative530967 - 53165325449.6
50s ribosomal protein l32EF834_02490Not AvailableNegative531864 - 5320376423.98
type b 50s ribosomal protein l31EF834_02495Not AvailableNegative532041 - 53231010179.0

Displaying genes 491 – 500 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.