Rhodococcus spongiicola strain LHW50502

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus spongiicola strain LHW50502 is characterized by the presence of flagella, which suggests motility capabilities that could enhance its ecological adaptability. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and stability in its environment. The accession number for this strain is RKLN00000000.1, which serves as a reference for researchers seeking genetic and genomic information. The presence of flagella in Rhodococcus spongiicola strain LHW50502 may provide insights into its ecological roles, particularly in diverse environments where mobility can influence nutrient acquisition and interaction with other microorganisms. The capacity for motility can be crucial for survival in nutrient-limited conditions, potentially allowing this strain to locate and utilize resources more effectively than non-motile counterparts. Overall, the traits of Rhodococcus spongiicola strain LHW50502 highlight its potential ecological significance and adaptability, especially in environments that require the ability to navigate and respond to varying conditions. Further research could elucidate the specific ecological niches this strain occupies and its interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus spongiicola
Strainstrain LHW50502

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus spongiicola strain LHW50502 scaffold29, whole genome

Gene Summary

Adenine Count

664627 bp

Thymine Count

664691 bp

Guanine Count

1316265 bp

Cytosine Count

1322090 bp

Genome Length

3970093 bp

Protein-coding Genes

3444 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseEF834_02350Not AvailablePositive502993 - 50456458651.2
duf2786 domain-containing proteinEF834_02355Not AvailablePositive504681 - 50588644113.1
aminodeoxychorismate synthase component iEF834_02360Not AvailablePositive505971 - 50726646264.8
wd40 repeat domain-containing proteinEF834_02365Not AvailableNegative507187 - 511242143895.0
16s rrna (cytidine(1402)-2'-o)-methyltransferaseEF834_02370Not AvailableNegative511644 - 51247429205.1
phospholipid carrier-dependent glycosyltransferaseEF834_02375Not AvailablePositive512549 - 51405755034.5
doxx family proteinEF834_02380Not AvailableNegative514117 - 51454514710.3
gntr family transcriptional regulatorEF834_02385Not AvailableNegative514704 - 51506312906.5
nad(p)-dependent oxidoreductaseEF834_02390Not AvailableNegative515105 - 51579123685.0
arsenate reductase (glutaredoxin)EF834_02395Not AvailablePositive515863 - 51625814393.3

Displaying genes 471 – 480 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.