Rhodococcus spongiicola strain LHW50502

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus spongiicola strain LHW50502 is characterized by the presence of flagella, which suggests motility capabilities that could enhance its ecological adaptability. This strain is notable for having a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and stability in its environment. The accession number for this strain is RKLN00000000.1, which serves as a reference for researchers seeking genetic and genomic information. The presence of flagella in Rhodococcus spongiicola strain LHW50502 may provide insights into its ecological roles, particularly in diverse environments where mobility can influence nutrient acquisition and interaction with other microorganisms. The capacity for motility can be crucial for survival in nutrient-limited conditions, potentially allowing this strain to locate and utilize resources more effectively than non-motile counterparts. Overall, the traits of Rhodococcus spongiicola strain LHW50502 highlight its potential ecological significance and adaptability, especially in environments that require the ability to navigate and respond to varying conditions. Further research could elucidate the specific ecological niches this strain occupies and its interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus spongiicola
Strainstrain LHW50502

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus spongiicola strain LHW50502 scaffold29, whole genome

Gene Summary

Adenine Count

664627 bp

Thymine Count

664691 bp

Guanine Count

1316265 bp

Cytosine Count

1322090 bp

Genome Length

3970093 bp

Protein-coding Genes

3444 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crcb family proteinEF834_06370Not AvailablePositive1340863 - 134122812667.8
fluoride efflux transporter crcbEF834_06375Not AvailablePositive1341225 - 134156911536.3
alpha-d-glucose phosphate-specific phosphoglucomutaseEF834_06380Not AvailablePositive1341633 - 134327057741.0
mfs transporterEF834_06385Not AvailablePositive1343306 - 134469447752.1
hypothetical proteinEF834_06390Not AvailableNegative1344551 - 134544731003.4
doxx family membrane proteinEF834_06395Not AvailablePositive1345311 - 134585619264.9
dsba family proteinEF834_06400Not AvailablePositive1345945 - 134669726147.3
Trna-alaNot AvailableNot AvailablePositive1346843 - 1346918Not Available
alkylmercury lyaseEF834_06410Not AvailablePositive1347140 - 134744810801.6
gtp-binding proteinEF834_06420Not AvailablePositive1348537 - 134960738864.7

Displaying genes 1261 – 1270 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.