Citrobacter amalonaticus strain FDAARGOS_490

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain FDAARGOS_490 is a Gram-negative bacterium primarily found in the gut environment. As a facultative anaerobe, this strain is capable of thriving in both aerobic and anaerobic conditions, allowing it to adapt to varying oxygen levels within the gastrointestinal tract. This adaptability is crucial for its survival and function in a complex microbial community, where fluctuations in oxygen availability can occur due to dietary changes and metabolic activities of other gut microorganisms. The presence of C. amalonaticus in the gut suggests it may play a role in the fermentation of carbohydrates and the metabolism of various organic compounds, potentially influencing gut health and microbial dynamics. While its specific interactions and contributions to the gut microbiome are not detailed in the available data, the ability of facultative anaerobes like C. amalonaticus to utilize different metabolic pathways highlights their importance in maintaining ecological balance within the gut ecosystem. Further research could elucidate the specific roles of this strain in nutrient cycling and its interactions with other gut inhabitants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain FDAARGOS_490

Accession NumberRKJA00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4664 genes

Non-Coding Genes

382 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Portal proteinEGW07_00595Not Available-75840 - 7632418078.2
Portal proteinEGW07_00600Not Available-76335 - 7803861112.4
hypotheticalEGW07_00605Not Available-78566 - 7889411792.1
AttlNot AvailableNot Available+78725 - 78736Not Available
hypotheticalEGW07_00610Not Available-78930 - 791447859.77
Gp63EGW07_00615Not Available-79207 - 7957513615.0
Lysis protein rzEGW07_00620Not Available-79578 - 8013620324.5
Hypothetical proteinEGW07_00625Not Available-80176 - 8066118213.7
Class i holinEGW07_00630Not Available-80675 - 8098210765.3
Antitermination protein qEGW07_00635Not Available-81155 - 8158516289.4

Displaying genes 1 – 10 of 5047 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites