Citrobacter amalonaticus strain FDAARGOS_490

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain FDAARGOS_490 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. Its primary habitat is the gut, where it resides in association with Homo sapiens, indicating its potential role in the human microbiome. The strain is notable for having a single replicon, which is relevant for understanding its genetic stability and replication processes. The accession number for Citrobacter amalonaticus strain FDAARGOS_490 is RKJA00000000.1, which provides a reference for genomic data and further research. In the context of its ecological role, Citrobacter amalonaticus may contribute to the gut microbiota's diversity and functionality, potentially influencing human health through various mechanisms, such as nutrient metabolism and interaction with the immune system. Given its facultative anaerobic nature, this strain may also play a role in maintaining gut homeostasis under varying oxygen conditions, highlighting its adaptability and importance in the gastrointestinal ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
Strainstrain FDAARGOS_490

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter amalonaticus strain FDAARGOS_490
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain FDAARGOS_490

Gene Summary

Adenine Count

1223787 bp

Thymine Count

1220891 bp

Guanine Count

1375352 bp

Cytosine Count

1382720 bp

Genome Length

5203074 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

382 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate hydrogenlyase subunit 3EGW07_02995Not AvailableNegative529596 - 53142263902.1
4fe-4s dicluster domain-containing proteinEGW07_03000Not AvailableNegative531419 - 53203021798.4
formate hydrogenlyase regulator hycaEGW07_03005Not AvailableNegative532167 - 53262817639.9
hydrogenase maturation nickel metallochaperone hypaEGW07_03010Not AvailablePositive532839 - 53318913130.8
hydrogenase nickel incorporation protein hypbEGW07_03015Not AvailablePositive533193 - 53406531488.6
hypc/hybg/hupf family hydrogenase formation chaperoneEGW07_03020Not AvailablePositive534056 - 5343289769.69
hydrogenase formation protein hypdEGW07_03025Not AvailablePositive534328 - 53544941504.0
hydrogenase expression/formation protein hypeEGW07_03030Not AvailablePositive535446 - 53645635067.5
formate hydrogenlyase transcriptional activator flhaEGW07_03035Not AvailablePositive536682 - 53876078148.2
nitrous oxide-stimulated promoter family proteinEGW07_03040Not AvailableNegative538838 - 53918213512.6

Displaying genes 791 – 800 of 5047 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.