Citrobacter amalonaticus strain FDAARGOS_490

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain FDAARGOS_490 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. Its primary habitat is the gut, where it resides in association with Homo sapiens, indicating its potential role in the human microbiome. The strain is notable for having a single replicon, which is relevant for understanding its genetic stability and replication processes. The accession number for Citrobacter amalonaticus strain FDAARGOS_490 is RKJA00000000.1, which provides a reference for genomic data and further research. In the context of its ecological role, Citrobacter amalonaticus may contribute to the gut microbiota's diversity and functionality, potentially influencing human health through various mechanisms, such as nutrient metabolism and interaction with the immune system. Given its facultative anaerobic nature, this strain may also play a role in maintaining gut homeostasis under varying oxygen conditions, highlighting its adaptability and importance in the gastrointestinal ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
Strainstrain FDAARGOS_490

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter amalonaticus strain FDAARGOS_490
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain FDAARGOS_490

Gene Summary

Adenine Count

1223787 bp

Thymine Count

1220891 bp

Guanine Count

1375352 bp

Cytosine Count

1382720 bp

Genome Length

5203074 bp

Protein-coding Genes

4664 genes

Non-Coding Genes

382 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEGW07_00250Not AvailablePositive24421 - 2489718214.2
hypothetical proteinEGW07_00260Not AvailablePositive25222 - 2556913341.2
type iv secretion system protein tracEGW07_00265Not AvailablePositive25696 - 2832699307.4
type-f conjugative transfer system protein trbiEGW07_00270Not AvailablePositive28323 - 2870914163.0
protein trawEGW07_00275Not AvailablePositive28706 - 2933823631.7
conjugal transfer protein trauEGW07_00280Not AvailablePositive29335 - 3032736667.4
periplasmic protein trbcEGW07_00285Not AvailablePositive30336 - 3097423435.2
type-f conjugative transfer system mating-pair stabilization protein tranEGW07_00290Not AvailablePositive30971 - 3277965881.4
conjugal transfer protein trbeEGW07_00295Not AvailablePositive32806 - 330639746.92
type-f conjugative transfer system pilin assembly protein trafEGW07_00300Not AvailablePositive33056 - 3379927965.6

Displaying genes 351 – 360 of 5047 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.