Rathayibacter sp. PhB93

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. PhB93 is a Gram-positive bacterium characterized by its rod shape. This species possesses a single replicon, indicating a streamlined genetic organization. The genomic data for Rathayibacter sp. PhB93 is accessible through the accession number RJLA00000000.1, which provides a basis for further molecular and genetic studies. As a member of the Rathayibacter genus, this bacterium is noteworthy for its potential ecological roles, particularly in plant-pathogen interactions. The Gram-positive nature of Rathayibacter sp. PhB93 suggests it may have unique cell wall properties that could influence its interaction with host plants and other microorganisms in its environment. Its rod shape may also play a role in its motility and colonization abilities. Understanding the traits of Rathayibacter sp. PhB93 contributes to the broader knowledge of microbial diversity and the ecological dynamics within the environments it inhabits. The single replicon can provide insights into its evolutionary adaptations, potentially reflecting a specialization in niche exploitation or survival strategies. This bacterium's characteristics may have implications for agricultural practices, especially in managing plant diseases associated with the Rathayibacter genus. Overall, Rathayibacter sp. PhB93 presents an interesting subject for further research into its ecological roles and genetic characteristics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. PhB93
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. PhB93 Ga0304845_109, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3859 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamyl-trna synthetaseEDF54_3760Not AvailableNegative4129653 - 413119456238.4
rna polymerase sigma-b factorEDF54_3761Not AvailablePositive4131535 - 413243432383.5
adp-heptose:lps heptosyltransferaseEDF54_3762Not AvailableNegative4132394 - 413341635695.6
histidinol-phosphate phosphatase family protein/had superfamily hydrolase (tigr01662 family)EDF54_3763Not AvailablePositive4133570 - 413417220601.6
adp-heptose:lps heptosyltransferaseEDF54_3764Not AvailablePositive4134169 - 413523935923.1
glycosyl transferase family 1EDF54_3765Not AvailablePositive4135236 - 413624336590.6
glycosyltransferase involved in cell wall biosynthesisEDF54_3766Not AvailablePositive4136240 - 413755646104.9
d-sedoheptulose 7-phosphate isomeraseEDF54_3767Not AvailablePositive4137553 - 413819722538.2
rfae bifunctional protein kinase chain/domain/rfae bifunctional protein nucleotidyltransferase chain/domainEDF54_3768Not AvailablePositive4138203 - 413957045507.2
nadp-dependent 3-hydroxy acid dehydrogenase ydfgEDF54_3769Not AvailablePositive4139673 - 414037724453.2

Displaying genes 3711 – 3720 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.