Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 48 - 164 | Not Available |
| hypothetical protein | C5C18_00005 | Not Available | Negative | 1 - 223 | 7698.12 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 350 - 3464 | Not Available |
| diviva domain-containing protein | C5C18_00010 | Not Available | Negative | 406 - 957 | 20132.7 |
| phosphatidate cytidylyltransferase | C5C18_00015 | Not Available | Negative | 1025 - 1963 | 32766.5 |
| ribosome recycling factor | C5C18_00020 | Not Available | Negative | 2062 - 2616 | 20435.5 |
| ump kinase | C5C18_00025 | Not Available | Negative | 2649 - 3380 | 25775.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4207 - 5736 | Not Available |
| elongation factor ts | C5C18_00030 | Not Available | Negative | 3515 - 4342 | 29065.4 |
| 30s ribosomal protein s2 | C5C18_00035 | Not Available | Negative | 4522 - 5508 | 35538.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |