Rhodococcus sp. SBT000017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SBT000017 is a bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait can be significant for its ecological interactions and potential adaptability in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may influence its replication and stability. The accession number for Rhodococcus sp. SBT000017 is REFU00000000.1, which provides a reference for further genetic studies and comparative analyses with other strains. Such genomic data can be useful for understanding the evolutionary relationships within the Rhodococcus genus and their biochemical pathways. Rhodococcus species are known for their versatile metabolic capabilities, including the degradation of a variety of organic compounds. The motility conferred by flagella may enhance the strain's ability to locate and exploit diverse substrates in its environment, potentially aiding in bioremediation efforts or soil health. The ecological insights gained from studying Rhodococcus sp. SBT000017 could contribute to understanding how this bacterium interacts with its environment, particularly in the context of nutrient cycling and organic matter decomposition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SBT000017
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SBT000017 Rhodococcus_SBT17_contig_5, whole genome

Gene Summary

Adenine Count

1009670 bp

Thymine Count

990833 bp

Guanine Count

1806077 bp

Cytosine Count

1841643 bp

Genome Length

5648223 bp

Protein-coding Genes

5169 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched-chain amino acid abc transporter permeaseAYK61_02635Not AvailableNegative591714 - 59270334976.3
branched-chain amino acid abc transporter permeaseAYK61_02640Not AvailableNegative592708 - 59404847034.9
dna polymerase iAYK61_02645Not AvailablePositive594309 - 59705099270.4
thioredoxinAYK61_02650Not AvailableNegative597128 - 59749913266.6
helix-turn-helix domain-containing proteinAYK61_02655Not AvailableNegative597585 - 59858335658.8
2'-5' rna ligase family proteinAYK61_02660Not AvailableNegative598793 - 59929918235.7
isocitrate/isopropylmalate dehydrogenase family proteinAYK61_02665Not AvailablePositive599310 - 60040738928.2
class i sam-dependent methyltransferaseAYK61_02670Not AvailableNegative600423 - 60125030017.2
30s ribosomal protein s1AYK61_02675Not AvailablePositive601466 - 60294454264.6
hypothetical proteinAYK61_02680Not AvailableNegative603101 - 6033107665.24

Displaying genes 521 – 530 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.