Rhodococcus sp. SBT000017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. SBT000017 is a bacterial strain characterized by the presence of flagella, which suggests motility capabilities. This trait can be significant for its ecological interactions and potential adaptability in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may influence its replication and stability. The accession number for Rhodococcus sp. SBT000017 is REFU00000000.1, which provides a reference for further genetic studies and comparative analyses with other strains. Such genomic data can be useful for understanding the evolutionary relationships within the Rhodococcus genus and their biochemical pathways. Rhodococcus species are known for their versatile metabolic capabilities, including the degradation of a variety of organic compounds. The motility conferred by flagella may enhance the strain's ability to locate and exploit diverse substrates in its environment, potentially aiding in bioremediation efforts or soil health. The ecological insights gained from studying Rhodococcus sp. SBT000017 could contribute to understanding how this bacterium interacts with its environment, particularly in the context of nutrient cycling and organic matter decomposition.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. SBT000017
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. SBT000017 Rhodococcus_SBT17_contig_5, whole genome

Gene Summary

Adenine Count

1009670 bp

Thymine Count

990833 bp

Guanine Count

1806077 bp

Cytosine Count

1841643 bp

Genome Length

5648223 bp

Protein-coding Genes

5169 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta hydrolaseAYK61_24920Not AvailableNegative5252780 - 525361928996.3
rok family proteinAYK61_24925Not AvailableNegative5253688 - 525483939619.5
sdr family oxidoreductaseAYK61_24930Not AvailablePositive5255302 - 525605726444.4
l,d-transpeptidaseAYK61_24935Not AvailableNegative5256118 - 525732342214.8
mbl fold metallo-hydrolaseAYK61_24940Not AvailableNegative5257399 - 525894958027.8
udp-n-acetylmuramate dehydrogenaseAYK61_24945Not AvailableNegative5259011 - 526002735365.7
duf2505 domain-containing proteinAYK61_24950Not AvailablePositive5260086 - 526059517713.7
duf2505 domain-containing proteinAYK61_24955Not AvailablePositive5260607 - 526111018746.2
class i sam-dependent methyltransferaseAYK61_24960Not AvailablePositive5261157 - 526195129071.2
hypothetical proteinAYK61_24965Not AvailableNegative5262004 - 526259121420.3

Displaying genes 4841 – 4850 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.