Parapedobacter sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Parapedobacter

Description

Parapedobacter sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which is indicative of its genetic structure. The genomic information for Parapedobacter sp. can be accessed through the accession number RDDX00000000.1. The classification of Parapedobacter sp. within the broader context of microbiology highlights its potential ecological roles. As a member of the bacterial domain, this organism may contribute to various ecological processes, including nutrient cycling and the degradation of organic materials. While specific ecological interactions or applications have not been detailed, the presence of Gram-negative bacteria in diverse environments suggests a potential for involvement in complex microbial communities. Understanding the traits of Parapedobacter sp. contributes to the broader knowledge of microbial diversity and functionality. Its classification as a Gram-negative rod and the possession of a single replicon may provide insights into its metabolic capabilities and adaptive strategies in various habitats. These characteristics can be crucial for researchers looking to explore its ecological significance or potential applications in biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusParapedobacter
SpeciesParapedobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Parapedobacter sp. isolate BP8.3

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4228 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mbl fold metallo-hydrolaseEAS52_04805Not AvailableNegative979915 - 98074531112.9
rna polymerase sigma-70 factorEAS52_04810Not AvailablePositive981073 - 98169923893.5
quinoprotein glucose dehydrogenaseEAS52_04815Not AvailableNegative981805 - 98329054021.1
dihydrodipicolinate synthase family proteinEAS52_04820Not AvailableNegative983294 - 98434638794.6
epimeraseEAS52_04825Not AvailableNegative984353 - 98537237245.8
divalent metal cation transporterEAS52_04830Not AvailableNegative985393 - 98661943308.8
sodium transporterEAS52_04835Not AvailableNegative986632 - 98819757536.9
hypothetical proteinEAS52_04840Not AvailableNegative988205 - 9883866465.76
aconitate hydrataseEAS52_04845Not AvailableNegative988387 - 98904624236.1
duf4112 domain-containing proteinEAS52_04850Not AvailableNegative989079 - 98955818730.7

Displaying genes 951 – 960 of 5215 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.