Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter composti |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parapedobacter composti
Accession NumberFOLL00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3993 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 1 - 65 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 31 - 142 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 208 - 3078 | 18.01 |
| hypothetical protein | SAMN05421747_1012 | Not Available | - | 185 - 799 | 22897.6 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05421747_1013 | Not Available | - | 799 - 1524 | 27087.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421747_1014 | Not Available | - | 1527 - 2480 | 35530.5 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 3543 - 5068 | 18.01 |
| c-terminal domain of chu protein family protein | SAMN05421747_1015 | Not Available | - | 2512 - 4107 | 59535.3 |
| aspartate-semialdehyde dehydrogenase | SAMN05421747_1016 | Not Available | + | 4210 - 5205 | 36123.6 |
| nicotinamidase/pyrazinamidase | SAMN05421747_1017 | Not Available | + | 5209 - 5799 | 21520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.