Parapedobacter sp.

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Parapedobacter

Description

Parapedobacter sp. is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which is indicative of its genetic structure. The genomic information for Parapedobacter sp. can be accessed through the accession number RDDX00000000.1. The classification of Parapedobacter sp. within the broader context of microbiology highlights its potential ecological roles. As a member of the bacterial domain, this organism may contribute to various ecological processes, including nutrient cycling and the degradation of organic materials. While specific ecological interactions or applications have not been detailed, the presence of Gram-negative bacteria in diverse environments suggests a potential for involvement in complex microbial communities. Understanding the traits of Parapedobacter sp. contributes to the broader knowledge of microbial diversity and functionality. Its classification as a Gram-negative rod and the possession of a single replicon may provide insights into its metabolic capabilities and adaptive strategies in various habitats. These characteristics can be crucial for researchers looking to explore its ecological significance or potential applications in biotechnology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusParapedobacter
SpeciesParapedobacter sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Parapedobacter sp. isolate BP8.3

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4228 genes

Non-Coding Genes

36 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEAS52_20300Not AvailablePositive4183260 - 418437540877.1
hypothetical proteinEAS52_20305Not AvailablePositive4184587 - 418530727295.7
hypothetical proteinEAS52_20310Not AvailableNegative4185507 - 418589615071.1
hypothetical proteinEAS52_20315Not AvailablePositive4186098 - 418654416034.5
energy transducer tonbEAS52_20320Not AvailablePositive4186569 - 41868329902.17
hypothetical proteinEAS52_20325Not AvailablePositive4186855 - 418784737903.9
hypothetical proteinEAS52_20335Not AvailablePositive4188585 - 41888309138.83
type ii crispr-associated endonuclease cas1EAS52_20340Not AvailablePositive4188833 - 418972933642.4
crispr-associated endonuclease cas2EAS52_20345Not AvailablePositive4189736 - 419006813135.0
susc/raga family tonb-linked outer membrane proteinEAS52_20350Not AvailablePositive4190717 - 419125420921.4

Displaying genes 3991 – 4000 of 5215 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.