Citrobacter amalonaticus strain ca_0067

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter amalonaticus strain ca_0067 is a Gram-negative bacterium that resides predominantly in the gut environment. This strain exhibits facultative anaerobic characteristics, allowing it to thrive in both aerobic and anaerobic conditions. This adaptability enhances its survival and metabolic versatility within the diverse microbial community of the gastrointestinal tract. As a member of the Citrobacter genus, C. amalonaticus is noteworthy for its ability to ferment various carbohydrates, which contributes to its ecological role in the gut microbiome. Its presence may play a role in the fermentation processes that are crucial for nutrient absorption and the maintenance of gut health. The ability to inhabit the gut suggests that C. amalonaticus strain ca_0067 may participate in complex interactions with other gut microbes, potentially influencing the overall metabolic activities and homeostasis of the intestinal ecosystem. The facultative anaerobic nature of Citrobacter amalonaticus strain ca_0067 also implies a potential resilience to fluctuating oxygen levels in the gut, which can vary significantly due to dietary changes and host physiology. This adaptability underscores the importance of C. amalonaticus in microbial succession and stability in the gut microbiota, contributing to our understanding of microbial dynamics in health and disease. Thus, the ecological role of this strain highlights its potential significance within the intricate balance of gut microbiome interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter amalonaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter amalonaticus strain ca_0067

Accession NumberRCYA00000000.1

Gene Summary

Adenine Count

1134336 bp

Thymine Count

1139730 bp

Guanine Count

1275514 bp

Cytosine Count

1326850 bp

Genome Length

4876430 bp

Protein-coding Genes

4333 genes

Non-Coding Genes

406 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
EndopeptidaseEAJ18_01830Not Available-368711 - 36919617914.7
Trna-met;Not AvailableNot Available+368857 - 368932Not Available
LysinEAJ18_01835Not Available-369193 - 36966917502.7
Holin proteinEAJ18_01840Not Available-369656 - 36997311275.9
Hypothetical proteinEAJ18_01845Not Available-370136 - 3703548342.08
Bacteriophage antiterminator protein qEAJ18_01850Not Available-370492 - 37118125894.9
Conserved hypothetical bacteriophage proteinEAJ18_01855Not Available-371178 - 3712733771.64
NingEAJ18_01860Not Available-371314 - 37192523222.8
NineEAJ18_01865Not Available-371918 - 3720886460.96
Gp64EAJ18_01870Not Available-372081 - 37251816471.8

Displaying genes 41 – 50 of 4739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites