Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-synthase | BCL90_0909 | Not Available | Positive | 1071290 - 1072651 | 49659.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | BCL90_0910 | Not Available | Negative | 1072928 - 1074253 | 48102.8 |
| uncharacterized protein duf4290 | BCL90_0911 | Not Available | Negative | 1074334 - 1075026 | 26819.7 |
| phosphohistidine phosphatase | BCL90_0913 | Not Available | Negative | 1075861 - 1076358 | 18598.1 |
| adp-heptose:lps heptosyltransferase | BCL90_0914 | Not Available | Negative | 1076351 - 1077382 | 38505.8 |
| uncharacterized protein duf4254 | BCL90_0915 | Not Available | Negative | 1077490 - 1078092 | 23348.6 |
| dna polymerase (family 10) | BCL90_0916 | Not Available | Negative | 1078251 - 1079927 | 62713.5 |
| hypothetical protein | BCL90_0917 | Not Available | Positive | 1080014 - 1080643 | 22866.2 |
| protease-4 | BCL90_0918 | Not Available | Negative | 1080813 - 1082579 | 65046.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BCL90_0919 | Not Available | Positive | 1082623 - 1083126 | 18662.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
