Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BCL90_0556 | Not Available | Positive | 714428 - 715435 | 38646.2 |
| lyttr family two component transcriptional regulator | BCL90_0557 | Not Available | Positive | 715513 - 716247 | 27772.7 |
| phosphoribosyl-atp pyrophosphohydrolase | BCL90_0558 | Not Available | Positive | 716771 - 717238 | 17654.9 |
| alpha/beta hydrolase family protein | BCL90_0559 | Not Available | Positive | 717257 - 718108 | 32123.7 |
| l-rhamnose-h+ transport protein | BCL90_0560 | Not Available | Positive | 718508 - 719602 | 39831.5 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | BCL90_0561 | Not Available | Positive | 719631 - 721751 | 76650.5 |
| l-rhamnose isomerase/sugar isomerase | BCL90_0562 | Not Available | Positive | 722130 - 723410 | 47226.2 |
| sugar (pentulose or hexulose) kinase | BCL90_0563 | Not Available | Positive | 723426 - 724811 | 52279.5 |
| regulatory gntr family protein | BCL90_0564 | Not Available | Positive | 724854 - 725885 | 39182.6 |
| snf2 family dna or rna helicase | BCL90_0565 | Not Available | Positive | 726293 - 729679 | 129849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
