Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin superfamily protein | BCL90_5291 | Not Available | Positive | 6011680 - 6012906 | 46839.9 |
| hypothetical protein | BCL90_5292 | Not Available | Positive | 6012906 - 6013955 | 39223.6 |
| fad binding domain-containing protein | BCL90_5293 | Not Available | Negative | 6014018 - 6015058 | 39351.8 |
| hypothetical protein | BCL90_5294 | Not Available | Positive | 6015521 - 6015718 | 7579.35 |
| integrase-like protein | BCL90_5295 | Not Available | Negative | 6015662 - 6015910 | 9332.58 |
| hypothetical protein | BCL90_5296 | Not Available | Positive | 6016600 - 6017286 | 25204.4 |
| putative nuclease of restriction endonuclease-like (recb) superfamily | BCL90_5297 | Not Available | Positive | 6017613 - 6018761 | 44484.8 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | BCL90_5299 | Not Available | Positive | 6021999 - 6022595 | 22725.5 |
| hypothetical protein | BCL90_5301 | Not Available | Negative | 6023441 - 6023941 | 20255.5 |
| tir domain-containing protein | BCL90_5303 | Not Available | Negative | 6025865 - 6026911 | 39972.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
