Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_5281 | Not Available | Negative | 5999275 - 6000606 | 51444.1 |
| uncharacterized protein involved in type vi secretion and phage assembly | BCL90_5282 | Not Available | Negative | 6000614 - 6002440 | 66224.5 |
| lysr family cyn operon transcriptional activator | BCL90_5283 | Not Available | Negative | 6003038 - 6003931 | 33231.4 |
| hypothetical protein | BCL90_5284 | Not Available | Positive | 6004040 - 6004591 | 20486.2 |
| hypothetical protein | BCL90_5285 | Not Available | Positive | 6004607 - 6005599 | 35582.0 |
| hypothetical protein | BCL90_5286 | Not Available | Negative | 6005843 - 6005977 | 5251.32 |
| peptidase s41-like protein | BCL90_5287 | Not Available | Negative | 6005981 - 6007732 | 65707.9 |
| putative ribosomally synthesized peptide | BCL90_5288 | Not Available | Positive | 6007962 - 6008300 | 11556.3 |
| hypothetical protein | BCL90_5289 | Not Available | Negative | 6008220 - 6008399 | 6564.24 |
| type 2 lantibiotic biosynthesis protein lanm | BCL90_5290 | Not Available | Positive | 6008433 - 6011687 | 122776.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
