Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | BCL90_5153 | Not Available | Negative | 5857883 - 5858737 | 32628.4 |
| pas domain s-box-containing protein | BCL90_5154 | Not Available | Negative | 5858836 - 5860812 | 73804.4 |
| hypothetical protein | BCL90_5155 | Not Available | Positive | 5860891 - 5861226 | 12920.6 |
| hypothetical protein | BCL90_5156 | Not Available | Positive | 5861750 - 5862301 | 20935.9 |
| pesticin immunity protein | BCL90_5157 | Not Available | Negative | 5862678 - 5863934 | 46205.8 |
| hypothetical protein | BCL90_5158 | Not Available | Negative | 5863931 - 5864392 | 17354.7 |
| hypothetical protein | BCL90_5159 | Not Available | Negative | 5864741 - 5865013 | 10694.8 |
| c-terminal processing protease ctpa/prc | BCL90_5161 | Not Available | Positive | 5865960 - 5867366 | 50835.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_5162 | Not Available | Positive | 5867431 - 5868042 | 23941.8 |
| fecr family protein | BCL90_5163 | Not Available | Positive | 5868637 - 5869665 | 39303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
