Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase n-terminal domain/subunit | BCL90_5014 | Not Available | Positive | 5688659 - 5690206 | 57155.9 |
| chromosomal replication initiator protein dnaa | BCL90_5015 | Not Available | Positive | 5690761 - 5692191 | 53909.2 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | BCL90_5016 | Not Available | Negative | 5692350 - 5692898 | 20867.9 |
| hypothetical protein | BCL90_5017 | Not Available | Negative | 5692941 - 5693330 | 15064.2 |
| uncharacterized protein | BCL90_5018 | Not Available | Negative | 5693508 - 5694284 | 26705.8 |
| tlp18.3/psb32/molo-1 phosphatase superfamily protein | BCL90_5019 | Not Available | Negative | 5694288 - 5694731 | 16222.4 |
| lema protein | BCL90_5020 | Not Available | Negative | 5694814 - 5695395 | 21185.2 |
| hypothetical protein | BCL90_5021 | Not Available | Positive | 5696001 - 5697542 | 56306.8 |
| putative damage-inducible protein dinb | BCL90_5022 | Not Available | Positive | 5697576 - 5698043 | 17344.3 |
| hypothetical protein | BCL90_5023 | Not Available | Positive | 5698060 - 5698419 | 13428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
