Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4940 | Not Available | Positive | 5618247 - 5619206 | 37114.7 |
| excinuclease abc subunit a | BCL90_4941 | Not Available | Positive | 5619319 - 5622243 | 108946.0 |
| tatd dnase family protein | BCL90_4942 | Not Available | Positive | 5622321 - 5623088 | 28757.6 |
| asparaginase | BCL90_4943 | Not Available | Positive | 5623513 - 5624532 | 37764.5 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | BCL90_4944 | Not Available | Positive | 5624906 - 5626318 | 51291.7 |
| thioredoxin reductase (nadph) | BCL90_4945 | Not Available | Positive | 5626424 - 5627389 | 35741.1 |
| esterase/lipase | BCL90_4946 | Not Available | Negative | 5627597 - 5628589 | 37213.1 |
| octaprenyl-diphosphate synthase | BCL90_4947 | Not Available | Positive | 5628751 - 5629851 | 41432.3 |
| tellurite resistance protein terc | BCL90_4948 | Not Available | Positive | 5629851 - 5630906 | 40004.4 |
| pa domain-containing protein | BCL90_4949 | Not Available | Positive | 5631095 - 5632543 | 52417.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
