Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spoiiaa-like protein | BCL90_4895 | Not Available | Negative | 5575350 - 5575739 | 14580.9 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | BCL90_4896 | Not Available | Negative | 5575743 - 5577107 | 49872.9 |
| putative glutamine amidotransferase | BCL90_4897 | Not Available | Negative | 5577136 - 5577855 | 27429.4 |
| alcohol dehydrogenase class iv | BCL90_4898 | Not Available | Negative | 5577965 - 5579113 | 42094.7 |
| glutamine synthetase | BCL90_4899 | Not Available | Negative | 5579198 - 5580559 | 51065.0 |
| ethanolamine permease | BCL90_4900 | Not Available | Negative | 5580559 - 5581872 | 47070.0 |
| zn-dependent protease with chaperone function | BCL90_4901 | Not Available | Positive | 5582011 - 5584155 | 82574.8 |
| putative membrane protein yiaa | BCL90_4902 | Not Available | Negative | 5584193 - 5584600 | 15127.7 |
| hydroxyethylthiazole kinase-like uncharacterized protein yjef/hydroxyethylthiazole kinase-like uncharacterized protein yjef | BCL90_4903 | Not Available | Positive | 5584922 - 5586418 | 54612.1 |
| uncharacterized protein (aim24 family) | BCL90_4904 | Not Available | Positive | 5586547 - 5587248 | 25401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
