Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | BCL90_4885 | Not Available | Positive | 5564919 - 5566022 | 42723.5 |
| uncharacterized protein duf721 | BCL90_4886 | Not Available | Positive | 5566015 - 5566305 | 11189.9 |
| hypothetical protein | BCL90_4887 | Not Available | Negative | 5566404 - 5566583 | 6365.29 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | BCL90_4888 | Not Available | Negative | 5566847 - 5567617 | 27448.2 |
| nucleoside diphosphate kinase | BCL90_4889 | Not Available | Negative | 5567752 - 5568171 | 15240.9 |
| phosphoesterase recj-like protein | BCL90_4890 | Not Available | Positive | 5568399 - 5569427 | 38108.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | BCL90_4891 | Not Available | Positive | 5569474 - 5570469 | 35794.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | BCL90_4892 | Not Available | Positive | 5570667 - 5571635 | 34851.3 |
| adenylate cyclase | BCL90_4893 | Not Available | Negative | 5571930 - 5572400 | 18328.6 |
| hexosaminidase | BCL90_4894 | Not Available | Negative | 5572451 - 5574400 | 73467.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
