Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase c (cathepsin a) | BCL90_4872 | Not Available | Positive | 5550389 - 5551948 | 58461.3 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | BCL90_4874 | Not Available | Positive | 5552536 - 5553498 | 35797.4 |
| uncharacterized protein duf2723 | BCL90_4875 | Not Available | Negative | 5553787 - 5556825 | 114158.0 |
| uncharacterized protein duf2723 | BCL90_4876 | Not Available | Negative | 5557042 - 5560068 | 114317.0 |
| Trna-gln | Not Available | Not Available | Positive | 5560296 - 5560369 | Not Available |
| ribose-phosphate pyrophosphokinase | BCL90_4878 | Not Available | Positive | 5560439 - 5561380 | 33983.2 |
| large subunit ribosomal protein l25 | BCL90_4879 | Not Available | Positive | 5561507 - 5562091 | 21514.4 |
| pth1 family peptidyl-trna hydrolase | BCL90_4880 | Not Available | Positive | 5562298 - 5562858 | 20478.0 |
| tetratricopeptide repeat protein | BCL90_4883 | Not Available | Negative | 5563617 - 5564282 | 24304.0 |
| hypothetical protein | BCL90_4884 | Not Available | Negative | 5564406 - 5564813 | 15391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
