Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4840 | Not Available | Negative | 5503035 - 5503448 | 15462.3 |
| hypothetical protein | BCL90_4841 | Not Available | Negative | 5503676 - 5504290 | 23496.9 |
| histidine kinase | BCL90_4842 | Not Available | Positive | 5504604 - 5505608 | 38490.3 |
| lyttr family two component transcriptional regulator | BCL90_4843 | Not Available | Positive | 5505605 - 5506297 | 26468.4 |
| hypothetical protein | BCL90_4844 | Not Available | Positive | 5506315 - 5508072 | 66585.0 |
| sulp family sulfate permease | BCL90_4845 | Not Available | Positive | 5508664 - 5510199 | 55313.9 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4846 | Not Available | Positive | 5510720 - 5513734 | 113691.0 |
| putative outer membrane starch-binding protein | BCL90_4847 | Not Available | Positive | 5513736 - 5515286 | 58004.6 |
| f5/8 type c domain-containing protein | BCL90_4848 | Not Available | Positive | 5515298 - 5516407 | 41199.9 |
| uncharacterized protein duf5007 | BCL90_4849 | Not Available | Positive | 5516444 - 5517535 | 41099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
