Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4830 | Not Available | Negative | 5489494 - 5489811 | 12205.8 |
| crp-like camp-binding protein | BCL90_4831 | Not Available | Negative | 5489959 - 5490540 | 22798.5 |
| trypsin-like peptidase | BCL90_4832 | Not Available | Negative | 5490800 - 5491654 | 30720.3 |
| thioredoxin | BCL90_4833 | Not Available | Negative | 5491710 - 5492801 | 41038.1 |
| thiol-disulfide isomerase/thioredoxin | BCL90_4834 | Not Available | Negative | 5492820 - 5494166 | 50125.6 |
| hypothetical protein | BCL90_4835 | Not Available | Negative | 5494224 - 5495141 | 33727.8 |
| putative outer membrane starch-binding protein | BCL90_4836 | Not Available | Negative | 5495153 - 5496733 | 59917.4 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4837 | Not Available | Negative | 5496745 - 5500404 | 136636.0 |
| fecr family protein | BCL90_4838 | Not Available | Negative | 5500538 - 5501695 | 43025.3 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_4839 | Not Available | Negative | 5501764 - 5502357 | 23026.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
