Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family ferric uptake transcriptional regulator | BCL90_4821 | Not Available | Positive | 5477163 - 5477660 | 19424.5 |
| outer membrane receptor protein involved in fe transport | BCL90_4822 | Not Available | Positive | 5477899 - 5480415 | 94541.2 |
| uncharacterized protein duf4374 | BCL90_4823 | Not Available | Positive | 5480461 - 5481675 | 43186.6 |
| iron complex transport system substrate-binding protein | BCL90_4824 | Not Available | Positive | 5481688 - 5482626 | 34921.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 5483063 - 5483134 | Not Available |
| beta-galactosidase | BCL90_4825 | Not Available | Negative | 5483669 - 5486092 | 89955.6 |
| hypothetical protein | BCL90_4826 | Not Available | Positive | 5486427 - 5486879 | 17499.3 |
| hypothetical protein | BCL90_4827 | Not Available | Negative | 5487368 - 5487700 | 13103.7 |
| hypothetical protein | BCL90_4828 | Not Available | Negative | 5487754 - 5488140 | 15261.5 |
| hypothetical protein | BCL90_4829 | Not Available | Negative | 5488151 - 5489365 | 44591.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
