Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond corrector protein dsbc | BCL90_4811 | Not Available | Positive | 5465031 - 5465483 | 17166.1 |
| hypothetical protein | BCL90_4812 | Not Available | Negative | 5465728 - 5466276 | 21240.7 |
| helix-turn-helix protein | BCL90_4813 | Not Available | Negative | 5466691 - 5467554 | 33038.9 |
| outer membrane protein tolc | BCL90_4814 | Not Available | Negative | 5467885 - 5469183 | 48116.1 |
| multidrug efflux pump subunit acrb | BCL90_4815 | Not Available | Negative | 5469194 - 5472325 | 115484.0 |
| rnd family efflux transporter mfp subunit | BCL90_4816 | Not Available | Negative | 5472385 - 5473416 | 36734.5 |
| arac family transcriptional regulator | BCL90_4817 | Not Available | Positive | 5473797 - 5474657 | 33099.9 |
| hypothetical protein | BCL90_4818 | Not Available | Positive | 5474789 - 5475211 | 16215.5 |
| arac family transcriptional regulator | BCL90_4819 | Not Available | Positive | 5475313 - 5476179 | 32605.2 |
| cobalt-zinc-cadmium efflux system protein | BCL90_4820 | Not Available | Positive | 5476192 - 5477151 | 35752.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
