Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4787 | Not Available | Negative | 5441696 - 5441851 | 5831.57 |
| putative mfs family arabinose efflux permease | BCL90_4788 | Not Available | Negative | 5441898 - 5443070 | 42379.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | BCL90_4790 | Not Available | Negative | 5443387 - 5444466 | 39213.8 |
| dimethyladenosine transferase | BCL90_4791 | Not Available | Positive | 5444639 - 5445424 | 29874.3 |
| thioredoxin-like protein | BCL90_4792 | Not Available | Positive | 5445619 - 5446218 | 22587.3 |
| atp-dependent clp protease adaptor protein clps | BCL90_4793 | Not Available | Negative | 5446351 - 5446632 | 10936.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | BCL90_4794 | Not Available | Positive | 5446803 - 5447849 | 38279.6 |
| uncharacterized protein duf4256 | BCL90_4796 | Not Available | Positive | 5448282 - 5448842 | 21362.2 |
| n-acetylglutamate synthase-like gnat family acetyltransferase | BCL90_4797 | Not Available | Negative | 5448850 - 5449350 | 18460.3 |
| carboxypeptidase family protein | BCL90_4798 | Not Available | Positive | 5449696 - 5452953 | 118964.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
