Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | BCL90_4756 | Not Available | Positive | 5410259 - 5411590 | 49644.8 |
| hypothetical protein | BCL90_4757 | Not Available | Positive | 5411611 - 5411799 | 6888.5 |
| rele toxin of releb toxin-antitoxin system | BCL90_4758 | Not Available | Positive | 5411799 - 5412131 | 12391.2 |
| aspartate aminotransferase | BCL90_4759 | Not Available | Positive | 5412237 - 5413490 | 45331.3 |
| hypothetical protein | BCL90_4760 | Not Available | Positive | 5413628 - 5413834 | 7735.33 |
| plasmid stabilization system protein pare | BCL90_4761 | Not Available | Positive | 5413834 - 5414127 | 11276.7 |
| pp_04553 | BCL90_4762 | Not Available | Negative | 5414239 - 5415663 | Not Available |
| hypothetical protein | BCL90_4763 | Not Available | Negative | 5415696 - 5416445 | 29515.1 |
| spfh domain/band 7 family protein | BCL90_4764 | Not Available | Negative | 5416523 - 5417620 | 41775.1 |
| putative dna-binding transcriptional regulator yafy | BCL90_4766 | Not Available | Positive | 5418646 - 5419677 | 39887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
