Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane receptor protein | BCL90_4716 | Not Available | Positive | 5363389 - 5366415 | 108483.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4717 | Not Available | Positive | 5366434 - 5367942 | 55015.8 |
| alpha,alpha-trehalase | BCL90_4718 | Not Available | Negative | 5368073 - 5369683 | 61405.6 |
| nad-dependent epimerase/dehydratase family protein | BCL90_4719 | Not Available | Positive | 5369787 - 5370458 | 24893.1 |
| dual-action heigh metallo-peptidase | BCL90_4720 | Not Available | Negative | 5370548 - 5371306 | 27106.3 |
| hypothetical protein | BCL90_4721 | Not Available | Positive | 5371613 - 5371930 | 11866.9 |
| hypothetical protein | BCL90_4722 | Not Available | Negative | 5372201 - 5372380 | 6487.42 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | BCL90_4723 | Not Available | Negative | 5372637 - 5373338 | 26196.5 |
| hypothetical protein | BCL90_4724 | Not Available | Positive | 5373617 - 5375266 | 64652.6 |
| putative hydrolase of the had superfamily | BCL90_4725 | Not Available | Negative | 5375527 - 5376171 | 24516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
