Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yjbi with pentapeptide repeats | BCL90_4686 | Not Available | Negative | 5331177 - 5331749 | 21586.6 |
| pyruvate dehydrogenase e1 component beta subunit | BCL90_4687 | Not Available | Negative | 5332182 - 5333168 | 35967.6 |
| ribosomal-protein-alanine n-acetyltransferase | BCL90_4688 | Not Available | Negative | 5333423 - 5334010 | 22829.4 |
| hypothetical protein | BCL90_4689 | Not Available | Positive | 5334175 - 5335296 | 42857.4 |
| pd-(d/e)xk nuclease superfamily protein | BCL90_4690 | Not Available | Negative | 5335402 - 5338257 | 109247.0 |
| atp-dependent exodnase (exonuclease v) beta subunit | BCL90_4691 | Not Available | Negative | 5338265 - 5341483 | 122399.0 |
| trna a37 threonylcarbamoyladenosine dehydratase | BCL90_4692 | Not Available | Negative | 5341612 - 5342415 | 29211.8 |
| tatd dnase family protein | BCL90_4693 | Not Available | Negative | 5342577 - 5343230 | 24381.9 |
| thioredoxin-like protein | BCL90_4694 | Not Available | Positive | 5343391 - 5343966 | 21187.7 |
| hypothetical protein | BCL90_4695 | Not Available | Negative | 5344053 - 5344262 | 7884.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
