Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | BCL90_4663 | Not Available | Positive | 5305591 - 5307699 | 78216.1 |
| lrp/asnc family transcriptional regulator for asna, asnc and gida | BCL90_4666 | Not Available | Negative | 5308237 - 5308713 | 17898.9 |
| laci family transcriptional regulator | BCL90_4667 | Not Available | Positive | 5309331 - 5310353 | 38372.8 |
| ribosome recycling factor | BCL90_4668 | Not Available | Negative | 5310412 - 5310948 | 19599.6 |
| uridylate kinase | BCL90_4669 | Not Available | Negative | 5311015 - 5311719 | 25969.8 |
| hypothetical protein | BCL90_4670 | Not Available | Negative | 5311852 - 5313477 | 57204.9 |
| carboxypeptidase family protein | BCL90_4671 | Not Available | Negative | 5313624 - 5316896 | 120105.0 |
| 3',5'-cyclic-nucleotide phosphodiesterase | BCL90_4672 | Not Available | Negative | 5316952 - 5317914 | 35695.9 |
| n-acetylglucosamine 6-phosphate deacetylase | BCL90_4673 | Not Available | Negative | 5317924 - 5319015 | 39345.6 |
| translation elongation factor ts (ef-ts) | BCL90_4674 | Not Available | Negative | 5319416 - 5320261 | 29883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
