Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase d | BCL90_4653 | Not Available | Positive | 5284603 - 5286006 | 52470.7 |
| allosteric nadp-dependent malic enzyme | BCL90_4654 | Not Available | Positive | 5286192 - 5288513 | 84472.6 |
| holliday junction dna helicase subunit ruva | BCL90_4655 | Not Available | Positive | 5288520 - 5289104 | 21365.1 |
| cell surface protein spra | BCL90_4656 | Not Available | Positive | 5289116 - 5296315 | 269705.0 |
| glycine cleavage system h protein | BCL90_4657 | Not Available | Positive | 5296535 - 5296915 | 13775.1 |
| hypothetical protein | BCL90_4658 | Not Available | Positive | 5296995 - 5297327 | 12664.5 |
| carboxypeptidase-like protein | BCL90_4659 | Not Available | Positive | 5297590 - 5300397 | 102170.0 |
| outer membrane receptor protein involved in fe transport | BCL90_4660 | Not Available | Positive | 5300672 - 5303407 | 101574.0 |
| putative alpha/beta superfamily hydrolase | BCL90_4661 | Not Available | Positive | 5303746 - 5305233 | 57026.4 |
| ferrous iron transport protein a | BCL90_4662 | Not Available | Positive | 5305364 - 5305579 | 7792.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
