Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i phosphodiesterase/nucleotide pyrophosphatase | BCL90_4617 | Not Available | Positive | 5250681 - 5252339 | 61571.4 |
| putative glyoxalase superfamily protein phnb | BCL90_4618 | Not Available | Positive | 5252579 - 5252947 | 14377.0 |
| methylmalonyl-coa mutase | BCL90_4619 | Not Available | Positive | 5253078 - 5256467 | 126336.0 |
| acyl-[acyl-carrier-protein] desaturase | BCL90_4620 | Not Available | Negative | 5256532 - 5257512 | 37901.3 |
| 23s rrna m(2)a-2503 methyltransferase | BCL90_4626 | Not Available | Negative | 5258955 - 5260010 | 39371.1 |
| ribosomal large subunit pseudouridine synthase f | BCL90_4627 | Not Available | Negative | 5260101 - 5261075 | 36245.4 |
| putative damage-inducible protein dinb | BCL90_4629 | Not Available | Negative | 5261745 - 5262305 | 21072.4 |
| hth domain-containing protein | BCL90_4630 | Not Available | Negative | 5262378 - 5263067 | 26938.0 |
| signal transduction histidine kinase | BCL90_4631 | Not Available | Positive | 5263200 - 5265677 | 94122.1 |
| two-component system response regulator hydg | BCL90_4632 | Not Available | Negative | 5265678 - 5267036 | 50586.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
