Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_4607 | Not Available | Negative | 5236480 - 5237130 | 24821.3 |
| glucokinase | BCL90_4608 | Not Available | Positive | 5237282 - 5238172 | 32502.9 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4609 | Not Available | Positive | 5238776 - 5241886 | 111170.0 |
| susd/ragb-like outer membrane lipoprotein | BCL90_4610 | Not Available | Positive | 5241898 - 5243538 | 59194.8 |
| glycosyl hydrolase family 18 (putative chitinase) | BCL90_4611 | Not Available | Positive | 5243830 - 5244795 | 34271.2 |
| hypothetical protein | BCL90_4612 | Not Available | Positive | 5245161 - 5247044 | 70136.6 |
| outer membrane transport energization protein exbb | BCL90_4613 | Not Available | Positive | 5247044 - 5247748 | 25600.1 |
| biopolymer transport protein exbd | BCL90_4614 | Not Available | Positive | 5247748 - 5248149 | 14860.4 |
| outer membrane transport energization protein tonb | BCL90_4615 | Not Available | Positive | 5248149 - 5248985 | 29301.5 |
| dihydrofolate synthase/folylpolyglutamate synthase | BCL90_4616 | Not Available | Positive | 5249324 - 5250613 | 47082.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
