Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dcc family thiol-disulfide oxidoreductase yuxk | BCL90_4597 | Not Available | Negative | 5221557 - 5221958 | 15549.0 |
| pyrimidine operon attenuation protein/uracil phosphoribosyltransferase | BCL90_4598 | Not Available | Positive | 5222231 - 5222779 | 20882.4 |
| aspartate carbamoyltransferase | BCL90_4599 | Not Available | Positive | 5222782 - 5223711 | 34270.0 |
| tetratricopeptide repeat protein | BCL90_4600 | Not Available | Positive | 5224018 - 5227041 | 115512.0 |
| tonb dependent receptor | BCL90_4601 | Not Available | Positive | 5227046 - 5228743 | 63077.8 |
| hypothetical protein | BCL90_4602 | Not Available | Positive | 5228781 - 5229113 | 12481.3 |
| hypothetical protein | BCL90_4603 | Not Available | Positive | 5230127 - 5230624 | 18987.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4604 | Not Available | Negative | 5230694 - 5232289 | 59514.5 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4605 | Not Available | Negative | 5232298 - 5235396 | 113154.0 |
| fecr family protein | BCL90_4606 | Not Available | Negative | 5235430 - 5236443 | 37798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
