Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | BCL90_4537 | Not Available | Positive | 5155038 - 5155502 | 17622.3 |
| putative dna-binding protein (mmcq/yjbr family) | BCL90_4538 | Not Available | Negative | 5155513 - 5155851 | 12986.7 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | BCL90_4539 | Not Available | Positive | 5156090 - 5156758 | 24478.1 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | BCL90_4540 | Not Available | Positive | 5157209 - 5158156 | 35546.7 |
| putative purr-regulated permease perm | BCL90_4541 | Not Available | Positive | 5158236 - 5159345 | 41336.6 |
| hypothetical protein | BCL90_4542 | Not Available | Positive | 5159347 - 5159643 | 10737.6 |
| putative membrane protein | BCL90_4543 | Not Available | Positive | 5159661 - 5160110 | 16899.5 |
| xtp/ditp diphosphohydrolase | BCL90_4544 | Not Available | Positive | 5160131 - 5160937 | 30788.4 |
| hypothetical protein | BCL90_4545 | Not Available | Positive | 5161013 - 5162137 | 43289.2 |
| sec-c motif-containing protein | BCL90_4546 | Not Available | Negative | 5162132 - 5162515 | 14792.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
