Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1080 | BCL90_4527 | Not Available | Negative | 5141950 - 5143314 | 50238.0 |
| putative dehydrogenase | BCL90_4528 | Not Available | Negative | 5143409 - 5144764 | 50590.1 |
| valyl-trna synthetase | BCL90_4529 | Not Available | Negative | 5145004 - 5147670 | 102452.0 |
| hypothetical protein | BCL90_4530 | Not Available | Negative | 5147700 - 5147915 | 7959.85 |
| uma2 family endonuclease | BCL90_4531 | Not Available | Negative | 5147936 - 5148571 | 23898.8 |
| uma2 family endonuclease | BCL90_4532 | Not Available | Negative | 5148620 - 5149252 | 24051.9 |
| cd2+/zn2+-exporting atpase | BCL90_4533 | Not Available | Negative | 5149392 - 5151380 | 72089.0 |
| putative endopeptidase | BCL90_4534 | Not Available | Positive | 5151729 - 5153762 | 75949.5 |
| hypothetical protein | BCL90_4535 | Not Available | Positive | 5153704 - 5153955 | 9574.03 |
| uncharacterized protein duf2625 | BCL90_4536 | Not Available | Positive | 5154214 - 5155014 | 30188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
