Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis lipoprotein | BCL90_4493 | Not Available | Positive | 5108748 - 5109743 | 36714.7 |
| hydroxypyruvate isomerase | BCL90_4494 | Not Available | Positive | 5109764 - 5110690 | 34738.5 |
| alpha-amylase | BCL90_4496 | Not Available | Negative | 5111396 - 5112883 | 56812.2 |
| hypothetical protein | BCL90_4497 | Not Available | Positive | 5112900 - 5113142 | 8846.99 |
| acyl-coa hydrolase | BCL90_4498 | Not Available | Positive | 5113772 - 5114293 | 19414.5 |
| sodium/proton antiporter (cpa1 family) | BCL90_4499 | Not Available | Positive | 5114365 - 5115546 | 43582.0 |
| hypothetical protein | BCL90_4500 | Not Available | Negative | 5115724 - 5116236 | 19208.2 |
| hypothetical protein | BCL90_4501 | Not Available | Positive | 5116723 - 5116932 | 7826.35 |
| putative rna-binding protein with pua-like domain | BCL90_4502 | Not Available | Negative | 5117202 - 5117606 | 15406.3 |
| putative atp-binding protein involved in virulence | BCL90_4503 | Not Available | Positive | 5118116 - 5119531 | 54780.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
