Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4482 | Not Available | Positive | 5097755 - 5097925 | 6230.56 |
| 3-methyladenine dna glycosylase alkd | BCL90_4483 | Not Available | Positive | 5098212 - 5098877 | 25197.5 |
| hypothetical protein | BCL90_4484 | Not Available | Positive | 5098968 - 5099156 | 7179.69 |
| dihydroorotate oxidase a | BCL90_4486 | Not Available | Negative | 5099744 - 5100772 | 38258.4 |
| hypothetical protein | BCL90_4487 | Not Available | Negative | 5100908 - 5101558 | 23280.6 |
| badm/rrf2 family transcriptional regulator | BCL90_4488 | Not Available | Negative | 5101630 - 5102040 | 14694.6 |
| atp-binding cassette subfamily f protein 3 | BCL90_4489 | Not Available | Positive | 5102205 - 5104112 | 71792.7 |
| uncharacterized protein duf5103 | BCL90_4490 | Not Available | Positive | 5104971 - 5106248 | 49606.0 |
| formylglycine-generating enzyme required for sulfatase activity | BCL90_4491 | Not Available | Positive | 5106419 - 5107384 | 36450.0 |
| secreted protein | BCL90_4492 | Not Available | Positive | 5107418 - 5108737 | 49057.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
