Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | BCL90_4450 | Not Available | Negative | 5048334 - 5048642 | 11849.1 |
| rhamnogalacturonyl hydrolase yesr | BCL90_4451 | Not Available | Negative | 5048865 - 5049992 | 43087.8 |
| glycosyl hydrolase family 2 | BCL90_4452 | Not Available | Negative | 5050013 - 5052916 | 109100.0 |
| lysophospholipase l1-like esterase | BCL90_4453 | Not Available | Negative | 5053012 - 5053803 | 28983.8 |
| lysophospholipase l1-like esterase | BCL90_4454 | Not Available | Negative | 5053926 - 5054693 | 28375.3 |
| rhamnogalacturonan endolyase | BCL90_4455 | Not Available | Negative | 5054704 - 5056554 | 67846.7 |
| alpha-l-arabinofuranosidase | BCL90_4456 | Not Available | Positive | 5057059 - 5059059 | 74829.9 |
| alpha-n-arabinofuranosidase | BCL90_4457 | Not Available | Positive | 5059073 - 5060614 | 57286.4 |
| hypothetical protein | BCL90_4458 | Not Available | Negative | 5061044 - 5063389 | 87461.7 |
| lysophospholipase l1-like esterase | BCL90_4459 | Not Available | Negative | 5063411 - 5064784 | 50593.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
