Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | BCL90_4440 | Not Available | Positive | 5031718 - 5032764 | 37874.9 |
| disulfide bond corrector protein dsbc | BCL90_4441 | Not Available | Positive | 5032789 - 5033238 | 16612.4 |
| thiol:disulfide interchange protein dsbd | BCL90_4442 | Not Available | Positive | 5033255 - 5034904 | 59740.4 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4443 | Not Available | Positive | 5035390 - 5038632 | 117724.0 |
| putative outer membrane starch-binding protein | BCL90_4444 | Not Available | Positive | 5038662 - 5040662 | 74539.1 |
| toxin yoeb | BCL90_4445 | Not Available | Negative | 5040729 - 5041004 | 10857.9 |
| antitoxin yefm | BCL90_4446 | Not Available | Negative | 5041008 - 5041283 | 10368.4 |
| xylan 1,4-beta-xylosidase | BCL90_4447 | Not Available | Positive | 5041832 - 5043502 | 62645.9 |
| glycosyl hydrolase family 28 | BCL90_4448 | Not Available | Negative | 5044242 - 5045507 | 46780.1 |
| glycosyl hydrolase family 2 | BCL90_4449 | Not Available | Negative | 5045559 - 5048330 | 103382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
