Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phytase | BCL90_4430 | Not Available | Negative | 5016070 - 5017146 | 39025.6 |
| hypothetical protein | BCL90_4431 | Not Available | Negative | 5017148 - 5018407 | 45313.7 |
| tonb-dependent receptor | BCL90_4432 | Not Available | Negative | 5018430 - 5021207 | 103796.0 |
| tetratricopeptide repeat protein | BCL90_4433 | Not Available | Negative | 5021468 - 5023072 | 61610.4 |
| acetyltransferase (gnat) family protein | BCL90_4434 | Not Available | Positive | 5023232 - 5023627 | 14947.3 |
| abc-2 type transport system atp-binding protein | BCL90_4435 | Not Available | Positive | 5024769 - 5025494 | 26195.9 |
| iron complex outermembrane receptor protein | BCL90_4436 | Not Available | Positive | 5025508 - 5028015 | 93736.2 |
| abc-2 type transport system permease protein | BCL90_4437 | Not Available | Positive | 5028015 - 5029463 | 54425.5 |
| abc-2 type transport system permease protein | BCL90_4438 | Not Available | Positive | 5029469 - 5030830 | 52676.4 |
| dna-binding lrp family transcriptional regulator | BCL90_4439 | Not Available | Negative | 5031054 - 5031521 | 17948.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
